Package: skater 0.1.2

skater: Utilities for SNP-Based Kinship Analysis

Utilities for single nucleotide polymorphism (SNP) based kinship analysis testing and evaluation. The 'skater' package contains functions for importing, parsing, and analyzing pedigree data, performing relationship degree inference, benchmarking relationship degree classification, and summarizing identity by descent (IBD) segment data. Package functions and methods are described in Turner et al. (2021) "skater: An R package for SNP-based Kinship Analysis, Testing, and Evaluation" <doi:10.1101/2021.07.21.453083>.

Authors:Stephen Turner [aut, cre], Matthew Scholz [aut], VP Nagraj [aut], Signature Science, LLC. [cph]

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Bug tracker:https://github.com/signaturescience/skater/issues

On CRAN:

16 exports 8 stars 1.59 score 68 dependencies 7 scripts 200 downloads

Last updated 2 years agofrom:97c2ba52c6. Checks:OK: 7. Indexed: no.

Exports:%>%arrange_idsconfusion_matrixdibblefam2pedibd2kinkin2cmkin2degreeped2kinpairplot_pedigreeread_aktread_famread_ibdread_ibisread_mapread_plink2_king

Dependencies:bitbit64caclicliprclustercodetoolscolorspacecorrrcpp11crayondplyrevaluatefansifarverforeachgclusgenericsggplot2ggrepelgluegtablehighrhmsisobanditeratorskinship2knitrlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepermutepillarpkgconfigprettyunitsprogresspurrrqapquadprogR6RColorBrewerRcppreadrregistryrlangscalesseriationstringistringrtibbletidyrtidyselectTSPtzdbutf8vctrsveganviridisLitevroomwithrxfunyaml