{ "_id": "6a181cb2acfb0bcc41db15b8", "Package": "focustools", "Title": "Forecasting COVID-19 in the United States (FOCUS) tools", "Version": "0.2.0", "Authors@R": "c(person(given = \"VP\",\nfamily = \"Nagraj\",\nrole = c(\"aut\", \"cre\"),\nemail = \"pnagraj@signaturescience.com\",\ncomment = c(ORCID = \"0000-0003-0060-566X\")),\nperson(given = \"Stephen\",\nfamily = \"Turner\",\nrole = \"aut\",\nemail = \"sturner@signaturescience.com\",\ncomment = c(ORCID = \"0000-0001-9140-9028\")),\nperson(given = \"Stephanie\",\nfamily = \"Guertin\",\nrole = \"aut\",\nemail = \"sguertin@signaturescience.com\"),\nperson(given = \"Chris\",\nfamily = \"Hulme-Lowe\",\nrole = \"aut\",\nemail = \"mscholz@signaturescience.com\")\n)", "Description": "Miscellaneous functions for retrieving data, creating and\nevaluating time series forecasting models for COVID-19 cases\nand deaths in the United States. Built for participation in the\nCOVID-19 Forecast Hub.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "RoxygenNote": "7.1.2", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "cmake make libicu-dev libpng-dev libuv1-dev\nlibssl-dev python3 libx11-dev zlib1g-dev", "Repository": "https://stephenturner.r-universe.dev", "Date/Publication": "2022-07-08 22:26:31 UTC", "RemoteUrl": "https://github.com/signaturescience/focustools", "RemoteRef": "HEAD", "RemoteSha": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-28 10:41:55 UTC", "User": "root" }, "Author": "VP Nagraj [aut, cre] (ORCID: ),\nStephen Turner [aut] (ORCID: ),\nStephanie Guertin [aut],\nChris Hulme-Lowe [aut]", "Maintainer": "VP Nagraj ", "MD5sum": "9957c3e970e1fd66df038123efb1c70a", "_user": "stephenturner", "_type": "src", "_file": "focustools_0.2.0.tar.gz", "_fileid": "8b796219abef42934e471dc7b6c456375d4d464441250fa143d1f4f631680ed7", "_filesize": 177599, "_sha256": "8b796219abef42934e471dc7b6c456375d4d464441250fa143d1f4f631680ed7", "_created": "2026-05-28T10:41:55.000Z", "_published": "2026-05-28T10:45:06.822Z", "_distro": "noble", "_jobs": [ { "job": 78273924961, "time": 156, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "7263845148" }, { "job": 78273924949, "time": 149, "config": "linux-release-x86_64", "r": "4.6.0", "check": "WARNING", "artifact": "7263843365" }, { "job": 78273925011, "time": 125, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "7263835469" }, { "job": 78273925005, "time": 103, "config": "macos-release-arm64", "r": "4.6.0", "check": "WARNING", "artifact": "7263828898" }, { "job": 78273366804, "time": 220, "config": "source", "r": "4.6.0", "check": "ERROR", "artifact": "7263795941" }, { "job": 78273924931, "time": 132, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7263837683" }, { "job": 78273924968, "time": 93, "config": "windows-devel", "r": "4.7.0", "check": "WARNING", "artifact": "7263825698" }, { "job": 78273925006, "time": 108, "config": "windows-oldrel", "r": "4.5.3", "check": "WARNING", "artifact": "7263830915" }, { "job": 78273924955, "time": 88, "config": "windows-release", "r": "4.6.0", "check": "WARNING", "artifact": "7263824115" } ], "_buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310", "_status": "failure", "_host": "GitHub-Actions", "_upstream": "https://github.com/signaturescience/focustools", "_commit": { "id": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "author": "VP Nagraj ", "committer": "GitHub ", "message": "Merge pull request #61 from signaturescience/v0.2.0\n\nv0.2.0 release", "time": 1657319191 }, "_maintainer": { "name": "VP Nagraj", "email": "pnagraj@signaturescience.com", "login": "vpnagraj", "description": "", "uuid": 8546787, "orcid": "0000-0003-0060-566X" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "magrittr", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "readr", "role": "Imports" }, { "package": "tidyr", "role": "Imports" }, { "package": "yaml", "role": "Imports" }, { "package": "glue", "role": "Imports" }, { "package": "fable", "role": "Imports" }, { "package": "fabletools", "role": "Imports" }, { "package": "tsibble", "role": "Imports" }, { "package": "MMWRweek", "role": "Imports" }, { "package": "httr", "role": "Imports" }, { "package": "lubridate", "role": "Imports" }, { "package": "purrr", "role": "Imports" }, { "package": "reticulate", "role": "Imports" }, { "package": "tibble", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "shiny", "role": "Imports" }, { "package": "scales", "role": "Imports" }, { "package": "feasts", "role": "Imports" }, { "package": "urca", "role": "Imports" }, { "package": "here", "role": "Suggests" }, { "package": "lifecycle", "role": "Suggests" }, { "package": "shinyWidgets", "role": "Suggests" }, { "package": "DT", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "signaturescience", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "vpnagraj", "count": 170, "uuid": 8546787 }, { "user": "stephenturner", "count": 128, "uuid": 460076 } ], "_userbio": { "uuid": 460076, "type": "user", "name": "Stephen Turner", "description": "Associate Professor at the University of Virginia School of Data Science." }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/focustools" }, "_devurl": "https://github.com/signaturescience/focustools", "_searchresults": 4, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/focustools.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_exports": [ "%>%", "extract_arima_params", "focus_explorer", "format_for_submission", "get_cases", "get_deaths", "is_monday", "make_tsibble", "plot_forecast", "submission_summary", "this_monday", "ts_fit", "ts_forecast", "ts_futurecases", "validate_forecast" ], "_help": [ { "page": "extract_arima_params", "title": "Extract ARIMA parameters", "topics": [ "extract_arima_params" ] }, { "page": "focus_explorer", "title": "Function to launch FOCUS Explorer shiny app", "topics": [ "focus_explorer" ] }, { "page": "focustools", "title": "'focustools' package", "topics": [ "focustools" ] }, { "page": "format_for_submission", "title": "Format forecast for COVID-19 Forecast Hub submission entry", "topics": [ "format_for_submission" ] }, { "page": "is_monday", "title": "Check Monday", "topics": [ "is_monday" ] }, { "page": "make_tsibble", "title": "Make 'tsibble'", "topics": [ "make_tsibble" ] }, { "page": "plot_forecast", "title": "Visualize forecast output", "topics": [ "plot_forecast" ] }, { "page": "retrieve", "title": "Retrieve data", "topics": [ "get_cases", "get_deaths", "retrieve" ] }, { "page": "spread_value", "title": "Reshape data for submission summary", "topics": [ "spread_value" ] }, { "page": "submission_summary", "title": "Summarize submission", "topics": [ "submission_summary" ] }, { "page": "this_monday", "title": "Get Monday", "topics": [ "this_monday" ] }, { "page": "ts_cumulative_forecast", "title": "Helper used in 'ts_forecast()' to get cumulative forecast from incident", "topics": [ "ts_cumulative_forecast" ] }, { "page": "ts_fit", "title": "Wrapper to fit time series models", "topics": [ "ts_fit" ] }, { "page": "ts_forecast", "title": "Generate time series forecasts including quantile estimates", "topics": [ "ts_forecast" ] }, { "page": "ts_futurecases", "title": "Helper to generate the estimate of incident cases from an icases forecast object", "topics": [ "ts_futurecases" ] }, { "page": "validate_forecast", "title": "Check for valid quantile csv file input", "topics": [ "validate_forecast" ] } ], "_readme": "https://github.com/signaturescience/focustools/raw/HEAD/README.md", "_rundeps": [ "anytime", "askpass", "base64enc", "BH", "bit", "bit64", "bslib", "cachem", "cli", "clipr", "commonmark", "cpp11", "crayon", "curl", "digest", "distributional", "dplyr", "fable", "fabletools", "farver", "fastmap", "feasts", "fontawesome", "fs", "generics", "ggdist", "ggplot2", "ggtime", "glue", "gtable", "here", "hms", "htmltools", "httpuv", "httr", "isoband", "jquerylib", "jsonlite", "labeling", "later", "lattice", "lifecycle", "lubridate", "magrittr", "Matrix", "memoise", "mime", "MMWRweek", "nlme", "numDeriv", "openssl", "otel", "pillar", "pkgconfig", "png", "prettyunits", "progress", "progressr", "promises", "purrr", "quadprog", "R6", "rappdirs", "RColorBrewer", "Rcpp", "RcppTOML", "readr", "reticulate", "rlang", "rprojroot", "S7", "sass", "scales", "shiny", "slider", "sourcetools", "stringi", "stringr", "sys", "tibble", "tidyr", "tidyselect", "timechange", "tsibble", "tzdb", "urca", "utf8", "vctrs", "viridisLite", "vroom", "warp", "withr", "xtable", "yaml" ], "_score": 1.6989700043360187, "_indexed": false, "_nocasepkg": "focustools", "_universes": [ "stephenturner" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.2.0", "date": "2026-05-28T10:44:33.000Z", "distro": "noble", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "180402d793efc7f44dca34ad75d5defe0e8145d6a0320bc65db486b7147be5db", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" }, { "r": "4.6.0", "os": "linux", "version": "0.2.0", "date": "2026-05-28T10:44:28.000Z", "distro": "noble", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "a9daa3fb29c255f80e4ea87206e2b995992ebb57a3a353a4438c3178675dc974", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" }, { "r": "4.5.3", "os": "mac", "version": "0.2.0", "date": "2026-05-28T10:43:58.000Z", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "306370d54ed6524ee6ece0490bc397e43753919eb2ab3df59cdb52a6c25ef2e1", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" }, { "r": "4.6.0", "os": "mac", "version": "0.2.0", "date": "2026-05-28T10:43:43.000Z", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "25000457500e4ef0b4956bf29b9b7d27035137619e4fbb12d76092600c9ca1f5", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" }, { "r": "4.6.0", "os": "wasm", "version": "0.2.0", "date": "2026-05-28T10:44:24.000Z", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "2594cb66fcdd546d22135c4952ee1a50dd16914eb34a2088acdd5c2f9f5b51c8", "status": "success", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" }, { "r": "4.7.0", "os": "win", "version": "0.2.0", "date": "2026-05-28T10:43:28.000Z", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "d6db54ce30ce809275dc660325ea150fd89f1e3dcd74b38a8801f878881e703b", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" }, { "r": "4.5.3", "os": "win", "version": "0.2.0", "date": "2026-05-28T10:43:42.000Z", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "1400af1b11bb34bc8422b6f2500d4bce71b2c1697470ad1ed880651dba19613a", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" }, { "r": "4.6.0", "os": "win", "version": "0.2.0", "date": "2026-05-28T10:43:23.000Z", "commit": "eb0fb54bc24abc70fe81390878a2837ad1a468d0", "fileid": "9cc0279c5142d748a4fa6eb25c588cf5d9aacf16f4bafb1a697cfd05d1f7d600", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/stephenturner/actions/runs/26569678310" } ] }